Institut de Génétique et Microbiologie - Université de Paris-Sud XI / CNRS
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Podospora anserina Genome Project

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Podospora's picture

    Podospora anserina is a filamentous fungus used in several molecular genetics laboratories to study various aspects of mycology and fundamental cell biology (ageing, differentiation and cell death, multicellularity, epigenetics...). This fungus is very helpful as a model system because of the simplicity of its culture, the speed and efficiency of its genetics analysis and the possibility to do molecular biology experiments. The complete sequences of the nuclear and mitochondrial genomes of strain S mat+ have been determined in collaboration with CNRS and Génoscope. Génoscope has performed the sequencing and assembly (click here for more information). Data are now available for BLAST search and download.


New : The paper presenting the major features of the Podospora anserina genome is now available in Genome Biology (direct link to the paper)

Release

[11 Dec 2009] Release version 6.22 : Assembly of 10x coverage now contains 60 Super contigs. This new release contains a set of 10627 predicted CDS and will be updated periodically.


Funding

The complete sequence was established through fundings from CNRS / Ministère de la recherche, "Séquençage à grande échelle 2002" and Génoscope. Bio-informatic tools were funded by IFR Génome.


Contacts

Project coordinator : Philippe Silar
Project management : Robert Debuchy
In silico genome analysis : Olivier Lespinet


Collaborators

Institut de Génétique et Microbiologie (Orsay, France) / IFR Génome
Centre de Génétique Moléculaire (Gif-sur-Yvette, France) / IFR Génome
Institut de Biochimie et Génétique Cellulaire (Bordeaux, France)
Laboratory of Genetics (Wageningen, The Netherlands)




Genoscope (Evry, France)
Genoscope's visual

Links to other fungal genomes


Génolevures
Whitehead Fungal Genome Initiative
JGI Sequencing Program
Fungal Genome Resource
Fungi Genome Projects


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Last modified 12-05-06.